euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

137 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1160 chr1 62390938 62390938 . unknown germline . no 242 INADL
srip2075 chr1 83609736 83609736 - unknown germline . no 242 .
srip2814 chr1 101978986 101978986 - unknown germline . no 242 .
srip3902 chr1 119553359 119553359 + unknown germline . no 242 .
srip5554 chr1 183969678 183969678 - unknown germline . no 242 GLT25D2
srip7223 chr1 237449858 237449858 . unknown germline . no 242 RYR2
srip7825 chr10 19065791 19065791 - unknown germline . no 242 .
srip8108 chr10 23842050 23842050 - unknown germline . no 242 .
srip8465 chr10 25707693 25707693 - unknown germline . no 242 GPR158
srip10595 chr10 91717640 91717640 - unknown germline . no 242 .
srip12553 chr11 15380252 15380252 + unknown germline . no 242 .
srip12799 chr11 25123346 25123346 - unknown germline . no 242 .
srip17190 chr11 94684368 94684368 + unknown germline . no 242 .
srip17661 chr11 104556129 104556129 - unknown germline . no 242 .
srip18651 chr11 133023068 133023068 + unknown germline . no 242 OPCML;LOC100128095
srip19286 chr11 134305645 134305645 - unknown germline . no 242 .
srip19911 chr12 11219195 11219195 - unknown germline . no 242 PRH1-PRR4
srip22211 chr12 43256979 43256979 - unknown germline . no 242 .
srip23506 chr12 71020040 71020040 + unknown germline . no 242 PTPRB
srip25097 chr12 95808445 95808445 - unknown germline . no 242 .
srip25650 chr12 117814453 117814453 - unknown germline . no 242 .
srip26908 chr13 22489798 22489798 + unknown germline . no 242 .
srip28002 chr13 42771396 42771396 + unknown germline . no 242 DGKH
srip29083 chr13 61462340 61462340 - unknown germline . no 242 .
srip29651 chr13 61734491 61734491 . unknown germline . no 242 .
srip30958 chr13 79259790 79259790 - unknown germline . no 242 .
srip31984 chr13 86340151 86340151 - unknown germline . no 242 .
srip33546 chr13 104296230 104296230 - unknown germline . no 242 .
srip35203 chr14 28301256 28301256 + unknown germline . no 242 .
srip35861 chr14 36674752 36674752 + unknown germline . no 242 .
srip36313 chr14 39875089 39875089 + unknown germline . no 242 FBXO33
srip37333 chr14 59220393 59220393 + unknown germline . no 242 .
srip38628 chr14 86381803 86381803 - unknown germline . no 242 .
srip39072 chr15 23743720 23743720 + unknown germline . no 242 .
srip40240 chr15 47507335 47507335 - unknown germline . no 242 SEMA6D
srip42253 chr15 77910869 77910869 . unknown germline . no 242 LINGO1
srip42533 chr15 83551628 83551628 - unknown germline . no 242 HOMER2
srip43259 chr15 100931152 100931152 - unknown germline . no 242 .
srip45224 chr16 33963452 33963452 . unknown germline . no 242 .
srip45511 chr16 33992437 33992437 . unknown germline . no 242 .
srip46362 chr16 72522723 72522723 + unknown germline . no 242 .
srip47195 chr17 28398310 28398310 + unknown germline . no 242 EFCAB5
srip48977 chr18 15095255 15095255 - unknown germline . no 242 .
srip49445 chr18 28732910 28732910 - unknown germline . no 242 DSC1
srip52435 chr19 45444694 45444694 + unknown germline . no 242 .
srip52855 chr2 11930107 11930107 + unknown germline . no 242 LPIN1
srip53478 chr2 23191008 23191008 - unknown germline . no 242 .
srip53727 chr2 32046161 32046161 . unknown germline . no 242 .
srip54106 chr2 36381245 36381245 + unknown germline . no 242 .
srip56211 chr2 82098034 82098034 + unknown germline . no 242 .
srip56864 chr2 106163161 106163161 + unknown germline . no 242 .
srip59192 chr2 147020925 147020925 + unknown germline . no 242 .
srip59955 chr2 177704488 177704488 - unknown germline . no 242 .
srip61935 chr2 221278227 221278227 - unknown germline . no 242 .
srip64043 chr20 25895497 25895497 - unknown germline . no 242 .
srip64597 chr20 40260336 40260336 . unknown germline . no 242 .
srip64780 chr20 41952105 41952105 - unknown germline . no 242 .
srip65855 chr21 19517305 19517305 - unknown germline . no 242 .
srip66923 chr21 29069178 29069178 + unknown germline . no 242 .
srip67489 chr22 22486374 22486374 - unknown germline . no 242 IGL@
srip67850 chr22 22715595 22715595 + unknown germline . no 242 IGL@
srip70458 chr3 20748900 20748900 - unknown germline . no 242 .
srip71085 chr3 26524455 26524455 - unknown germline . no 242 .
srip72721 chr3 55788574 55788574 + unknown germline . no 242 ERC2
srip73386 chr3 59852896 59852896 + unknown germline . no 242 FHIT
srip73789 chr3 75101217 75101217 + unknown germline . no 242 .
srip73927 chr3 75728590 75728590 + unknown germline . no 242 .
srip74018 chr3 79216299 79216299 + unknown germline . no 242 ROBO1
srip75080 chr3 84433390 84433390 + unknown germline . no 242 .
srip75281 chr3 84593276 84593276 . unknown germline . no 242 .
srip77617 chr3 133911304 133911304 + unknown germline . no 242 RYK
srip80074 chr3 175473514 175473514 . unknown germline . no 242 NAALADL2
srip80357 chr3 176091325 176091325 + unknown germline . no 242 .
srip81493 chr3 186372132 186372132 + unknown germline . no 242 .
srip82121 chr3 193354172 193354172 - unknown germline . no 242 OPA1
srip82672 chr4 15872175 15872175 - unknown germline . no 242 .
srip82986 chr4 18162684 18162684 - unknown germline . no 242 .
srip83848 chr4 29321856 29321856 + unknown germline . no 242 .
srip84023 chr4 37952111 37952111 - unknown germline . no 242 TBC1D1
srip84697 chr4 47007787 47007787 - unknown germline . no 242 .
srip87899 chr4 86607953 86607953 + unknown germline . no 242 ARHGAP24
srip89965 chr4 112628966 112628966 + unknown germline . no 242 .
srip90333 chr4 115132697 115132697 + unknown germline . no 242 .
srip92206 chr4 134596423 134596423 + unknown germline . no 242 .
srip92812 chr4 138177329 138177329 + unknown germline . no 242 .
srip94048 chr4 165231734 165231734 - unknown germline . no 242 MARCH1
srip94655 chr4 175685697 175685697 + unknown germline . no 242 GLRA3
srip95422 chr4 190842789 190842789 . unknown germline . no 242 .
srip95442 chr4 190969816 190969816 + unknown germline . no 242 .
srip96119 chr5 9970852 9970852 . unknown germline . no 242 .
srip97748 chr5 33633341 33633341 - unknown germline . no 242 ADAMTS12
srip98364 chr5 41602035 41602035 + unknown germline . no 242 .
srip100744 chr5 89450775 89450775 + unknown germline . no 242 .
srip103361 chr5 125040043 125040043 + unknown germline . no 242 .
srip104127 chr5 144330992 144330992 . unknown germline . no 242 .
srip104888 chr5 155333900 155333900 - unknown germline . no 242 .
srip105261 chr5 155619871 155619871 . unknown germline . no 242 .
srip107521 chr6 13503042 13503042 + unknown germline . no 242 .
srip108721 chr6 46310300 46310300 + unknown germline . no 242 .
srip111057 chr6 77980645 77980645 - unknown germline . no 242 .
srip112383 chr6 98096205 98096205 + unknown germline . no 242 .
srip112716 chr6 102283765 102283765 - unknown germline . no 242 GRIK2
srip112820 chr6 103488722 103488722 . unknown germline . no 242 .
srip113801 chr6 142450105 142450105 - unknown germline . no 242 .
srip114759 chr6 148195798 148195798 + unknown germline . no 242 .
srip115681 chr6 162181262 162181262 + unknown germline . no 242 PARK2
srip117458 chr7 52789459 52789459 + unknown germline . no 242 .
srip118297 chr7 62492938 62492938 + unknown germline . no 242 .
srip118518 chr7 66591179 66591179 - unknown germline . no 242 TYW1
srip118878 chr7 70188679 70188679 - unknown germline . no 242 AUTS2
srip121756 chr7 107829256 107829256 + unknown germline . no 242 NRCAM
srip122005 chr7 108325669 108325669 + unknown germline . no 242 .
srip122259 chr7 110484750 110484750 + unknown germline . no 242 IMMP2L
srip122682 chr7 124451318 124451318 . unknown germline . no 242 .
srip124059 chr8 4452901 4452901 - unknown germline . no 242 CSMD1
srip125444 chr8 24926547 24926547 - unknown germline . no 242 .
srip126873 chr8 67381884 67381884 - unknown germline . no 242 .
srip127445 chr8 72399228 72399228 - unknown germline . no 242 .
srip127582 chr8 75723729 75723729 + unknown germline . no 242 .
srip128263 chr8 87315042 87315042 + unknown germline . no 242 .
srip130125 chr8 131041227 131041227 + unknown germline . no 242 .
srip130341 chr8 134972233 134972233 + unknown germline . no 242 .
srip131084 chr9 6290487 6290487 + unknown germline . no 242 .
srip131741 chr9 19671075 19671075 - unknown germline . no 242 SLC24A2
srip132355 chr9 30495878 30495878 - unknown germline . no 242 .
srip132568 chr9 30674459 30674459 - unknown germline . no 242 .
srip133396 chr9 32463891 32463891 - unknown germline . no 242 DDX58
srip133626 chr9 34904794 34904794 - unknown germline . no 242 .
srip134040 chr9 74904917 74904917 - unknown germline . no 242 .
srip135583 chr9 111564963 111564963 + unknown germline . no 242 .
srip137260 chrX 54917144 54917144 + unknown germline . no 242 .
srip137348 chrX 55264659 55264659 - unknown germline . no 242 .
srip137575 chrX 55585154 55585154 - unknown germline . no 242 .
srip139785 chrX 98264296 98264296 . unknown germline . no 242 .
srip140468 chrX 111557754 111557754 - unknown germline . no 242 ZCCHC16
srip141079 chrX 122664864 122664864 - unknown germline . no 242 .
srip141385 chrX 129525275 129525275 - unknown germline . no 242 .